Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015952690.1_cds_XP_016492242.1_82476
CDS Infomation

[gene=LOC107811763] [db_xref=GeneID:107811763] [protein=heat shock 70 kDa protein 17] [protein_id=XP_016492242.1] [location=join(125812..126567,126995..127227,128319..128478,128808..129053,129162..129298,129373..129709,129854..130015,130623..130694,130780..130880,130972..131041,131597..131653,131765..131826,134396..134468,134594..134815)] [gbkey=CDS]
Sequence

ATGTTATTCCGAATAGGGATAATCCTATCATTGTTTTTGCTGCTCACTCCAATTCCATGT
CAATCCGCAGTTTCCAGCATAGATCTGGGATCCGAATGGTTCAAAGTCGCCGTGGTCAAC
TTAAAACCCGGTCAACCTCCAATCGCCATCGCTATTAACGAAATGTCCAAACGGAAAACT
CCGTCTCTCGTCGCATTTCACGCCGGCAGTCGCCTCATCGGCGAAGAAGCTTCTGGAATC
GTCGCTCGTTATCCCAACAAGGTTTACTCCCATCTCCGTGATCTAATATCAAAAACCTTC
CCGCACGTGTCCAAAACCCTTGAATCTCTCTACTTAAGTTATGATATTTCGCCCGAGGAA
TCGAGAAATGTGGCGGTTTTTAGGACTGAGAATGGTGATTTCACGTCGGAGGAGCTGGTG
GCGATGTTGTTGAAGTATGCCCTTGGATTGGCGGAGGCGCATACTCGGGGAACGCCAGTG
AAGGATGCGGTGGTGACTGTGCCGCCATATATGGGAGTGGCGGAGAGGAAAGGGCTGCTT
GTTGCGGCAGAATTGGCTGGTATCAATGTATTGGCGCTGGTGAATGAACATTCTGGTGCA
GCATTGCAGTATGGGATTGATAAAGATTTTTCAAATGGGTCAAGACATGTGATTTTCTAT
GATATGGGTGCGGGTAGTACCTATGCTGCCTTGGTCTACTTCTCTGCTTATAATACTAAG
GAGTTTGGGAAGACTGTCTCAGCTAACCAATTTCAGGTCAAGGATGTTAGATGGGATGCG
GAGCTGGGAGGGGAACATATGGAATTAAGATTGGTGGAGTACTTTGCGGATGAGTTCAAT
AAACAGCTTGGAAATGGGGTTGACATAAGGAAATCCCCAAAGGCAATGGCGAAGCTAAAG
AAACAAGTTAAGCGAACAAAGGAAATTCTTAGTGCAAATACAGCTGCTCCAATTTCAGTT
GAATCTATTTATGACGATCGGGATTTTAGGAGCTCAATAACTCGTGAGAAGTTTGAAGAG
TTATGTGAAGATTTGTGGGAAAAAGCTCTTGTACCGTTAAAGGAAGTTCTTACACATTCT
GGTTTGAAAGTGGAAGATATTTATGCAGTGGAGTTGATTGGAGGTGCCACCAGGGTGCCA
AAATTGCAGGCTAAGCTTCAAGAATTTCTTGGAAGGAAAGAACTGGACAGACACTTGGAC
TCTGATGAAGCAATTGCGCTTGGTGCCTCGTTGCATGCTGCAAATATAAGCGATGGAATC
AAGTTGAATCGTAAATTGGGGATGATTGATGGTTCTCCATATGGATATGTGATTGAAGTA
GATGGTCCAGATCTTCCCAAAGATGAAAGCACCAAACAGTTGATCATACCACGTATGAAG
AAACTACCCAGCAAGATGTTCAGATCCATTGTTCATAACAAGGATTTTGAAGTTTCACTA
GCATATGAAAGCGATGACTTCTTGCCACCTGGGACTCCTTCACTTACATTTGCTCAGTAT
GCAGTGTCAGGTCTTGCTGATGCCAGCGAGAAGTATGCATCACGGAATCTTTCTGCCCCC
GTCAAGGCTAATCTACATTTCTCCCTTAGTAGAAGTGGAATATTTTCATTAGATCGAGCT
GATGCTGTTATTGAAATAACTGAATGGGTGGAAGTTCCACGAAAGAATCTGACAGTGGAC
AACTCAACCTCTGCTTCTGCGAATACATCAACTGAAAGTAGCCCCAGTAATACAGAGGAA
AGCAGTGAAAATTTGAATGCAGACGGTGGTAACAGTAATACCTCTGATCCTAGTGCAAAC
GATTCTAGCACCACAAGTCTTAGTACAGAGAAGAAGCTGAAGAAACGGACTTTCCGAGTT
CCACTAAAGATTGAGGAGAAGACTGCTGGGCCAGGAGCATCCCTTTCGAAAGAATCTTTT
AGTGAAGCTAAAAGCAAACTAGAAGCACTGGACAAAAAAGATGAAGAAAGAAGAAGAACT
GCAGAATTGAAGAATAGCTTGGAAGGATACATATATGACACAAGAGACAAGCTTGAATCT
GAAGATTTTACAAAAGTTTCCACCAGTCAGGAGCGTCAATCATTTATTGAGAAACTTGAT
GAGGTACAAGAATGGTTGTACACTGATGGTGAAGATGCTTCTGCCACCCAGTTTCAAAAA
CGTTTAGATGAGCTGAAAGCTTTTGGTGATCCCATATTTTTTAGACATAATGAACTTACT
GCACGCCCTGCTGCATCTGATCATGCTCGCAAATACCTTAATGAAGTGCAACAGATTGTG
CATGGATGGGAAACAAACAAATCTTGGCTTCCTAAGGGAAGAATAGATGAGGTTTTAAAA
GAAGCTGAGAAAGTGAAGAATTGGTTAAATCAGAAGGTGGCTGAACAGAAAGACACTCCT
GGATTCAACAAGCCTGCATTTACTTCTGAAGAAGTATATGAAAAGGTTCTCGATCTTCAA
GACAAGGTTACTAAGGTAAATAGAATACCCAAACCGAAGCCAAAGATTGAGAAGCCTGTG
AAAAATGAAACTGAAAGCAGCAGGGAGAAAGCAGACGCTACCAACTTCTCTTCCGAGGAG
GGTACCTCCCAGAAAGAAAAAACAGCTTCAGATGCAGAAAAACCATCCACCAATGGAAAA
GCTGATGCCCAGTCTAAAGATCACGAATCAGACCATGATGAGTTATGA

Peptide Sequence

PEP ID

XP_016492242.1
PEP Infomation

PREDICTED: heat shock 70 kDa protein 17 [Nicotiana tabacum]
Sequence

MLFRIGIILSLFLLLTPIPCQSAVSSIDLGSEWFKVAVVNLKPGQPPIAIAINEMSKRKT
PSLVAFHAGSRLIGEEASGIVARYPNKVYSHLRDLISKTFPHVSKTLESLYLSYDISPEE
SRNVAVFRTENGDFTSEELVAMLLKYALGLAEAHTRGTPVKDAVVTVPPYMGVAERKGLL
VAAELAGINVLALVNEHSGAALQYGIDKDFSNGSRHVIFYDMGAGSTYAALVYFSAYNTK
EFGKTVSANQFQVKDVRWDAELGGEHMELRLVEYFADEFNKQLGNGVDIRKSPKAMAKLK
KQVKRTKEILSANTAAPISVESIYDDRDFRSSITREKFEELCEDLWEKALVPLKEVLTHS
GLKVEDIYAVELIGGATRVPKLQAKLQEFLGRKELDRHLDSDEAIALGASLHAANISDGI
KLNRKLGMIDGSPYGYVIEVDGPDLPKDESTKQLIIPRMKKLPSKMFRSIVHNKDFEVSL
AYESDDFLPPGTPSLTFAQYAVSGLADASEKYASRNLSAPVKANLHFSLSRSGIFSLDRA
DAVIEITEWVEVPRKNLTVDNSTSASANTSTESSPSNTEESSENLNADGGNSNTSDPSAN
DSSTTSLSTEKKLKKRTFRVPLKIEEKTAGPGASLSKESFSEAKSKLEALDKKDEERRRT
AELKNSLEGYIYDTRDKLESEDFTKVSTSQERQSFIEKLDEVQEWLYTDGEDASATQFQK
RLDELKAFGDPIFFRHNELTARPAASDHARKYLNEVQQIVHGWETNKSWLPKGRIDEVLK
EAEKVKNWLNQKVAEQKDTPGFNKPAFTSEEVYEKVLDLQDKVTKVNRIPKPKPKIEKPV
KNETESSREKADATNFSSEEGTSQKEKTASDAEKPSTNGKADAQSKDHESDHDEL

Transcript Sequence

Gene sequence data has not been registered.